Gordon Smyth Home:
Research
Presentations
Talks prior to 2002
2002
- Microarray data analysis. NHMRC Program Retreat, 26 February 2002.
- Print-order normalization of microarray data. Bioinformatics Seminar,
Walter and Eliza Hall Institute, 18 March 2002.
- Statistical issues in microarray data analysis, Annual General Meeting,
Statistical Society of Australia Victoria Branch, Melbourne, 26 March 2002
- Statistical issues in microarray data analysis, Department of Statistics,
La Trobe, Melbourne 24 May 2002
- Print-order normalization of microarray data, 16th Australian Statistical
Conference, Canberra, 11 July 2002
- Judging differential expression in microarray
experiments: penalized t-statistics, CBiS Microarray Workshop,
Canberra,
12 July 2002
- Quantitative quality measures, Australian Microarray Conference, Couran
Cove, 26 July 2002
- Statistical issues in microarray data analysis, School of Mathematical
Sciences, Monash University, 14 August 2002
- Identifying differentially expressed genes in
designed microarray experiments,
IIIe Cycle Genomic Days Symposium, DNA Microarrays in Biology and Medicine,
Lausanne, Switzerland, 13 September 2002, Invited Speaker
- Background correction and quality measures for microarray experiments,
Institute of Mathematics, Swiss Federal Institute of Technology, Lausanne,
Switzerland, 19 September 2002
- Adventures with microarrays and
transcription factors, Division of Genetics and Bioinformatics, WEHI,
Melbourne, 8 October 2002
- Statistics for Microarray Data Analysis (One Day Course), Australian
Genstat Conference, Perth, 2 December 2002, Invited Presenter (with Terry
Speed and Natalie Thorne)
- Identifying differentially expressed genes in designed microarray
experiments, Statistical Society of Australia South Australian Branch,
Adelaide, 11 December 2002
2003
- Design of microarray experiments, Analysis and Bioinformatic Issues
Relating to Microarray Expression Profiling: An ACRF Sponsored Meeting, St
Vincent’s Hospital Campus, Melbourne, 12 Feb 2003
- Identifying differentially expressed genes, Analysis and Bioinformatic
Issues Relating to Microarray Expression Profiling: An ACRF Sponsored Meeting,
St Vincent’s Hospital Campus, Melbourne, 12 Feb 2003
- Microarray data analysis, Victor Chang Institute, Sydney, 27 March 2003
- Adaptive normalization for spotted microarrays, Bioinformatics Group
Seminar, WEHI, Melbourne, 29 April 2003
- Empirical Bayes and mixed linear models for assessing differential
expression in cDNA microarray experiments, Theme Conference of the
Royal Statistical Society: Statistical Genetics and Bioinformatics, Diepenbeek,
Belgium, 16 July 2003 (PDF)
- Analysing complex microarray experiments, Australian Microarray
Conference, Couran Cove, 24 July 2003
- Session Chair, Australian Microarray Conference, Couran Cove, 25 July 2003
- Analysing complex microarray experiments, Division of Genetics and
Bioinformatics Seminar, WEHI, Melbourne 19 August 2003
- Microarray data analysis, CRC-CGF Bioinformatics Course, University of
Melbourne, 10 September 2003
- Linear models for microarray data, Microarray Practical Session, CRC-CGF
Bioinformatics Course, Walter and Eliza Hall Institute, 10 September 2003
(with James Wettenhall)
- Bioinformatics in a medical research institute, Australian Undergraduate
Students' Computing Conference, University of Melbourne, 25 September 2003,
Special Guest Speaker
- Common parameters in parallel regressions: extracting information from
within-array replicate spots, Bioinformatics Seminar, WEHI, Melbourne 7
October 2003
- Design and Analysis of Spotted Microarray Experiments,
Australian Mathematical Sciences Institute Summer Symposium in Bioinformatics,
Australian National University, Canberra, 5 December 2003, Keynote speaker.
2004
- Analysis of replicated microarray experiments, Statistical Methods in
Microarray Analysis Tutorial, Institute for Mathematical Sciences, National
University of Singapore 2 January 2004. (PDF)
- Analysis of complex microarray experiments, Statistical Methods in
Microarray Analysis Tutorial, Institute for Mathematical Sciences, National
University of Singapore 3 January 2004. (PDF)
- Analysis of designed microarray experiments, Hands-On Lab, Statistical
Methods in Microarray Analysis Tutorial, Institute for Mathematical Sciences,
National University of Singapore 3 January 2004. (PDF)
- Common parameters in parallel regressions: extracting information from
within-array replicate spots, Statistical Methods in Microarray Analysis,
Institute for Mathematical Sciences, National University of Singapore, 9
January 2004, Invited speaker
- Design and Analysis of Spotted Microarray Experiments, Department of
Mathematics, University of Melbourne, 26 May 2004. Presentation to honours
class.
- Statistics for Microarray Data Analysis Short Course, XXIInd International
Biometrics Conference, Cairns, 11 July 2004 (with Matthew Ritchie, Jean Yee
Hwa Yang and James Wettenhall). Invited presenter.
- Putting the Squeeze on Parameters in Microarray Data Analysis, Australian
Statistical Conference, Cairns, 13 July 2004, Keynote speaker
- Truth and Beauty in Microarray Data Analysis, Institute Talk, Walter and Eliza Hall
Institute of Medical Research, Melbourne, 25 August 2004.
- Statistical Analysis of Microarray Data, Melbourne Bioinformatics Course,
16 September 2004.
- 4th Australian Microarray Conference, Fremantle, Western Australia, 2
October 2004. Session chair.
- Bioinformatics & the Biologist, 4th Australian Microarray Conference,
Fremantle, Western Australia, 2 October 2004. Invited discussant.
- Bivariate (Individual Channel) Analysis of Two-Colour Microarray Data,
Bioinformatics Seminar, WEHI, Melbourne, 19 October 2004.
2005
- Analysing time course microarray experiments. Genetics and Bioinformatics Division, WEHI, 8 March 2005.
- Individual channel analysis of two-colour microarray data. Invited
Session IPM 11: Computational Tools For Microarray Analysis, 55th Session of the International Statistics Institute, Sydney, 12 April
2005. Invited speaker.
- Truth in microarray data analysis: comparing technologies and comparing
methods of analysis. Workshop on Large Scale Gene Expression Analysis,
Queensland Bioinformatics Consortium in conjunction with Bioinformatics
Australia, Queensland Bioscience Precinct, Brisbane, 20 April 2005. Invited
speaker.
- Parameter shrinkage and separate channel analysis of two-colour microarray
data. AMSI Symposium: Recent Advances in Biostatistics, Bioinformatics and Markov Chain Monte
Carlo, University of New South Wales, Sydney, 7 July 2005. Invited speaker.
- 20th International Workshop on Statistical Modelling, Sydney, 10-15 July
2005. Chair, Scientific Programme Committee.
- Microarray Statistical Analysis. 7th Melbourne Bioinformatics
Course, University of Melbourne, 21 July 2005.
http://www.ludwig.edu.au/course
- Differential expression analysis of microarray experiments. BioC2005 Bioconductor Conference, Fred Hutchinson Cancer Research Center,
Seattle, 16 August 2005. Invited presenter.
- Parameter shrinkage and separate channel analysis of two-colour microarray
data. Department of Epidemiology and Biostatistics,
University of California, San Francisco, 18 August 2005.
- Random effects, heteroscedastic regression, algorithms and microarray
data analysis. Symposium on Optimisation and Data Analysis
– In honour of Professor Mike Osborne's 70th birthday, 21-23
September 2005, Australian National University, Canberra. Keynote speaker.
- Parameter shrinkage and separate channel analysis of two-colour
microarray data. Bioinformatics Seminar, WEHI, 4 October 2005.
- Two colour microarrays: a calibration data set for evaluating
microarray platform accuracy. BioInfoSummer 2005, Australian National
University, Canberra, 1 December 2005. Invited
speaker. (PDF)
- Analysis of microarray time course experiments.
International Statistics Conference “Statistics in the Technological
Age”, Kuala Lumpur, Malaysia, 29 December 2005. Invited speaker.
2006
- Calibrating microarray platform accuracy, Discovery Science and Biotechnology, Melbourne, 3-5
May 2006. Invited speaker.
- Evaluating Microarray Accuracy (and Comparing Platforms), Statistics for gene and protein expression, Chalmers University of
Technology, Gothenburg, Sweden 10-12 May 2006. Invited speaker.
- Parameter Shrinkage and Separate Channel Analysis of Two-Colour
Microarray Data, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton,
Cambridge, 15 May 2006. Invited seminar.
- Serial analysis of gene expression: improving tests of differential
expression by parameter moderation, ASC/NZSA 2006, Australian
Statistical Conference/ New Zealand Statistical Association 2006, Auckland, 3-7 July 2006. Invited
speaker.
- A two-colour microarray RNA pooling experiment, WEHI
Bioinformatics Division, 22 August 2006.
- Statistical analysis of microarray data, 8th Melbourne
Bioinformatics Course, 7 September 2006.
- Microarrays in biomedical research, Genetics for Epidemiologists and Epidemiology for Geneticists,
15th Annual Meeting of the Australasian Epidemiological
Association, 17-19 September 2006. Invited speaker.
- Analysis of time-course microarray experiments, ComBio2006, Brisbane, 24-28 September 2006. Invited speaker.
- Finding patterns in microarray expression data,
Australian Health and Medical Research Congress,
Melbourne, 26 Nov-1 Dec 2006. Invited speaker.
2007
- Repeatability of microarray experiments, Bioinformatics Division
Seminar, WEHI, 20 March 2007.
- Borrowing strength in microarray data analysis, Bioinformatics Winter School
in Mathematical and Computational Biology, Queensland Bioscience Precinct, Brisbane, 28 June 2007.
Invited speaker.
- Hard and soft parameter shrinkage in microarray data analysis, Joint Statistical Meetings, Salt Lake City,
USA, 1 Aug 2007.
Invited speaker (in Contributed Topic session).
- Differential expression analysis of microarray experiments.
BioC2007
Bioconductor Conference, Seattle, USA, 6 August 2007. Invited short course
presenter.
- Moderated statistical tests for digital gene expression data, Statistics Seminar, University of Melbourne, 23 August 2007.
- Moderated statistical tests for digital gene technology. School of Mathematics
Symposium, University of Adelaide, 19 October 2007.
Invited speaker.
- Differential expression analysis of microarray data.
University of Copenhagen, 6 November 2007. Invited short course presenter.
- Microarrays, Linear Models and Medical Biology. Bioinformatics
workshop "From Bioinformatics to Medical Systems Biology", German Cancer
Research Center, Heidelberg, 13 November 2007. Keynote speaker.
- Borrowing strength in microarray data analysis. BioInfoSummer
2007, Australian National University, Canberra,
13 December 2007. Invited speaker.
2008
- Repeatability of microarray experiments, Australian Statistical Conference, Melbourne, 3 July 2007. Invited
speaker.
- Practical design issues for microarray experiments, International
Biometrics Conference, Dublin, 13-18 July 2008. Invited speaker.
- Half-day workshop on Bioconductor, AMATA 2008 Conference, Otago, New
Zealand, 15 November 2008.
- 4th World Conference of the International Association for Statistical
Computing, Yokohama, Japan, 5-8 December 2008. Invited speaker.
2010
- ASC2010. Australian Statistical Conference, Fremantle, Australia, 6-10 December 2006.
Plenary speaker.